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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24028 | - | 30489 | 90 | 21 | -19.4 | NP_944281 | 5' arm 3' arm | ||
| 23878 | + | 6371 | 90 | 20 | -19.5 | NP_944240 | 5' arm 3' arm | ||
| 24106 | - | 61538 | 89 | 21.5 | -19.51 | NP_944303 | 5' arm 3' arm | ||
| 23859 | + | 981 | 86 | 20 | -19.6 | NP_944233 | 5' arm 3' arm | ||
| 24055 | - | 44071 | 90 | 20 | -19.8 | NP_944297 | 5' arm 3' arm | ||
| 23908 | + | 21240 | 90 | 20 | -19.8 | NP_944265 | 5' arm 3' arm | ||
| 24091 | - | 56933 | 89 | 20.5 | -19.8 | NP_944303 | 5' arm 3' arm | ||
| 24030 | - | 31055 | 90 | 20.5 | -19.8 | NP_944282 | 5' arm 3' arm | ||
| 23904 | + | 19281 | 90 | 22 | -19.9 | NP_944261 | 5' arm 3' arm | ||
| 24019 | - | 27840 | 90 | 19.5 | -19.9 | NP_944280 | 5' arm 3' arm | ||
| 23987 | - | 13403 | 89 | 21.5 | -19.9 | NP_944252 | 5' arm 3' arm | ||
| 24032 | - | 31581 | 89 | 22 | -20 | NP_944284 | 5' arm 3' arm | ||
| 24016 | - | 27033 | 88 | 23 | -20 | 5' arm 3' arm | |||
| 23916 | + | 27192 | 90 | 22.5 | -20 | NP_944279 | 5' arm 3' arm | ||
| 23920 | + | 29553 | 89 | 20 | -20.1 | NP_944280 | 5' arm 3' arm | ||
| 24041 | - | 34896 | 89 | 19 | -20.1 | NP_944288 | 5' arm 3' arm | ||
| 24104 | - | 60479 | 90 | 20 | -20.1 | NP_944303 | 5' arm 3' arm | ||
| 24045 | - | 37540 | 90 | 20 | -20.2 | NP_944291 | 5' arm 3' arm | ||
| 23885 | + | 8786 | 89 | 22.5 | -20.3 | NP_944243 | 5' arm 3' arm | ||
| 23999 | - | 18614 | 89 | 20 | -20.3 | NP_944261 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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