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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23974 | - | 3904 | 89 | 20 | -21.5 | NP_944235 | 5' arm 3' arm | ||
| 23869 | + | 3648 | 90 | 22.5 | -25.6 | NP_944235 | 5' arm 3' arm | ||
| 23870 | + | 3848 | 85 | 20.5 | -22.5 | NP_944235 | 5' arm 3' arm | ||
| 23973 | - | 3517 | 89 | 19.5 | -21.8 | NP_944235 | 5' arm 3' arm | ||
| 23866 | + | 2847 | 89 | 21 | -24.1 | NP_944235 | 5' arm 3' arm | ||
| 23867 | + | 3308 | 83 | 20 | -27.3 | NP_944235 | 5' arm 3' arm | ||
| 23873 | + | 4802 | 89 | 21 | -26.5 | NP_944237 | 5' arm 3' arm | ||
| 23872 | + | 4657 | 90 | 20 | -29.3 | NP_944237 | 5' arm 3' arm | ||
| 23875 | + | 5292 | 90 | 24 | -29.1 | NP_944238 | 5' arm 3' arm | ||
| 23876 | + | 5418 | 80 | 20.5 | -27.5 | NP_944238 | 5' arm 3' arm | ||
| 23977 | - | 5702 | 88 | 20 | -25.6 | NP_944238 | 5' arm 3' arm | ||
| 23874 | + | 4982 | 90 | 21 | -24.7 | NP_944238 | 5' arm 3' arm | ||
| 23976 | - | 5613 | 87 | 20 | -23.8 | NP_944238 | 5' arm 3' arm | ||
| 23877 | + | 5831 | 90 | 22.5 | -26.5 | NP_944238 | 5' arm 3' arm | ||
| 23879 | + | 6617 | 87 | 19.5 | -30.1 | NP_944240 | 5' arm 3' arm | ||
| 23878 | + | 6371 | 90 | 20 | -19.5 | NP_944240 | 5' arm 3' arm | ||
| 23883 | + | 7699 | 89 | 21.5 | -24.8 | NP_944241 | 5' arm 3' arm | ||
| 23881 | + | 7286 | 89 | 19 | -23.8 | NP_944241 | 5' arm 3' arm | ||
| 23882 | + | 7529 | 89 | 20.5 | -25.9 | NP_944241 | 5' arm 3' arm | ||
| 23979 | - | 7390 | 87 | 20 | -23.2 | NP_944241 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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