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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24069 | - | 50051 | 89 | 27 | -28.54 | NP_944303 | 5' arm 3' arm | ||
| 23942 | + | 43505 | 88 | 21 | -28.5 | NP_944296 | 5' arm 3' arm | ||
| 23921 | + | 31398 | 89 | 21.5 | -28.3 | 5' arm 3' arm | |||
| 24107 | - | 61952 | 87 | 23 | -28.1 | NP_944304 | 5' arm 3' arm | ||
| 24061 | - | 46837 | 89 | 22 | -28.1 | NP_944302 | 5' arm 3' arm | ||
| 23975 | - | 4408 | 90 | 20.5 | -28 | 5' arm 3' arm | |||
| 23887 | + | 9180 | 89 | 22.5 | -27.9 | 5' arm 3' arm | |||
| 23863 | + | 1963 | 90 | 22 | -27.9 | NP_944234 | 5' arm 3' arm | ||
| 24034 | - | 32024 | 89 | 22.5 | -27.6 | NP_944284 | 5' arm 3' arm | ||
| 24008 | - | 24556 | 88 | 20 | -27.6 | NP_944276 | 5' arm 3' arm | ||
| 23961 | + | 57680 | 90 | 19 | -27.6 | NP_944303 | 5' arm 3' arm | ||
| 24108 | - | 62889 | 90 | 20 | -27.5 | NP_944307 | 5' arm 3' arm | ||
| 24103 | - | 60076 | 88 | 21 | -27.5 | NP_944303 | 5' arm 3' arm | ||
| 23996 | - | 17416 | 85 | 19.5 | -27.5 | NP_944260 | 5' arm 3' arm | ||
| 23876 | + | 5418 | 80 | 20.5 | -27.5 | NP_944238 | 5' arm 3' arm | ||
| 24066 | - | 48533 | 88 | 21 | -27.5 | NP_944303 | 5' arm 3' arm | ||
| 23970 | - | 205 | 90 | 25 | -27.4 | NP_944231 | 5' arm 3' arm | ||
| 23891 | + | 12165 | 87 | 21.5 | -27.4 | NP_944250 | 5' arm 3' arm | ||
| 23929 | + | 34920 | 88 | 20.5 | -27.3 | NP_944288 | 5' arm 3' arm | ||
| 23867 | + | 3308 | 83 | 20 | -27.3 | NP_944235 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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