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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23924 | + | 33183 | 90 | 19.5 | -21.5 | NP_944286 | 5' arm 3' arm | ||
| 24109 | - | 63722 | 90 | 19.5 | -26.1 | NP_944308 | 5' arm 3' arm | ||
| 23917 | + | 28193 | 89 | 19.5 | -21.1 | NP_944280 | 5' arm 3' arm | ||
| 23993 | - | 15569 | 89 | 19.5 | -21.9 | NP_944257 | 5' arm 3' arm | ||
| 24023 | - | 28786 | 90 | 19.5 | -23.1 | NP_944280 | 5' arm 3' arm | ||
| 24093 | - | 57332 | 89 | 19.5 | -27.2 | NP_944303 | 5' arm 3' arm | ||
| 23955 | + | 52218 | 90 | 19.5 | -24.7 | NP_944303 | 5' arm 3' arm | ||
| 23960 | + | 55914 | 83 | 19.5 | -25.1 | NP_944303 | 5' arm 3' arm | ||
| 24092 | - | 57190 | 84 | 19.5 | -23.1 | NP_944303 | 5' arm 3' arm | ||
| 23952 | + | 49953 | 84 | 19.5 | -23.7 | NP_944303 | 5' arm 3' arm | ||
| 24059 | - | 45981 | 86 | 19.5 | -22.8 | NP_944301 | 5' arm 3' arm | ||
| 23958 | + | 54990 | 89 | 19.5 | -26.5 | NP_944303 | 5' arm 3' arm | ||
| 23957 | + | 54373 | 86 | 19.5 | -21.2 | NP_944303 | 5' arm 3' arm | ||
| 23953 | + | 50864 | 89 | 19.5 | -33.9 | NP_944303 | 5' arm 3' arm | ||
| 23959 | + | 55680 | 85 | 19.5 | -32.7 | NP_944303 | 5' arm 3' arm | ||
| 23879 | + | 6617 | 87 | 19.5 | -30.1 | NP_944240 | 5' arm 3' arm | ||
| 23985 | - | 12223 | 90 | 19.5 | -24.9 | NP_944250 | 5' arm 3' arm | ||
| 24090 | - | 56802 | 87 | 19.5 | -30 | NP_944303 | 5' arm 3' arm | ||
| 23886 | + | 8892 | 88 | 20 | -21 | NP_944243 | 5' arm 3' arm | ||
| 23872 | + | 4657 | 90 | 20 | -29.3 | NP_944237 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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