miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23863	+	1963	90	22	-27.9	NP_944234		5' arm      3' arm
23860	+	1245	89	22	-21.1			5' arm      3' arm
23858	+	116	90	22	-24.7	NP_944231		5' arm      3' arm
23869	+	3648	90	22.5	-25.6	NP_944235		5' arm      3' arm
23864	+	2130	88	23	-21.2	NP_944234		5' arm      3' arm
23872	+	4657	90	20	-29.3	NP_944237		5' arm      3' arm
23871	+	4438	90	19	-22.6			5' arm      3' arm
23879	+	6617	87	19.5	-30.1	NP_944240		5' arm      3' arm
23886	+	8892	88	20	-21	NP_944243		5' arm      3' arm
23878	+	6371	90	20	-19.5	NP_944240		5' arm      3' arm
23882	+	7529	89	20.5	-25.9	NP_944241		5' arm      3' arm
23876	+	5418	80	20.5	-27.5	NP_944238		5' arm      3' arm
23874	+	4982	90	21	-24.7	NP_944238		5' arm      3' arm
23883	+	7699	89	21.5	-24.8	NP_944241		5' arm      3' arm
23884	+	8016	89	22	-30.5	NP_944242		5' arm      3' arm
23887	+	9180	89	22.5	-27.9			5' arm      3' arm
23885	+	8786	89	22.5	-20.3	NP_944243		5' arm      3' arm
23880	+	7101	88	22.5	-27.1			5' arm      3' arm
23877	+	5831	90	22.5	-26.5	NP_944238		5' arm      3' arm
23875	+	5292	90	24	-29.1	NP_944238		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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