miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23949	+	47868	87	21	-29.9			5' arm      3' arm
23912	+	26062	87	21	-29.9	NP_944278		5' arm      3' arm
23971	-	1128	90	22.5	-29.7	NP_944233		5' arm      3' arm
23981	-	9523	90	21	-29.7			5' arm      3' arm
23893	+	13708	81	21	-29.7	NP_944253		5' arm      3' arm
23906	+	19815	89	19	-29.6	NP_944262		5' arm      3' arm
24064	-	47945	89	19	-29.6			5' arm      3' arm
23967	+	62578	88	21.5	-29.5	NP_944306		5' arm      3' arm
23888	+	9434	90	23	-29.5			5' arm      3' arm
24071	-	50954	90	21	-29.4	NP_944303		5' arm      3' arm
23872	+	4657	90	20	-29.3	NP_944237		5' arm      3' arm
23950	+	48725	77	19	-29.2	NP_944303		5' arm      3' arm
23875	+	5292	90	24	-29.1	NP_944238		5' arm      3' arm
23984	-	12069	89	24.5	-29	NP_944249		5' arm      3' arm
24014	-	26648	86	22	-29	NP_944278		5' arm      3' arm
23933	+	38413	85	20	-28.9	NP_944292		5' arm      3' arm
23918	+	28286	89	20.5	-28.9	NP_944280		5' arm      3' arm
23892	+	12261	89	22	-28.8	NP_944250		5' arm      3' arm
24010	-	25303	87	21	-28.8	NP_944278		5' arm      3' arm
24009	-	24796	89	21	-28.8	NP_944277		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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