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| GenBank Identifier | RefSeq Acc. | Name |
| 47777280 | NC_005263.2 | Burkholderia cenocepacia phage Bcep1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24136 | + | 9394 | 90 | 26 | -29.3 | 5' arm 3' arm | |||
| 24186 | + | 28932 | 89 | 26 | -24.2 | NP_944350 | 5' arm 3' arm | ||
| 24118 | + | 3729 | 88 | 25.5 | -26.2 | NP_944313 | 5' arm 3' arm | ||
| 24216 | + | 39586 | 85 | 25 | -20.3 | NP_944364 | 5' arm 3' arm | ||
| 24244 | - | 5917 | 89 | 24.5 | -32.5 | NP_944318 | 5' arm 3' arm | ||
| 24312 | - | 39073 | 89 | 24.5 | -21.7 | NP_944363 | 5' arm 3' arm | ||
| 24179 | + | 26975 | 90 | 24.5 | -19.6 | NP_944346 | 5' arm 3' arm | ||
| 24114 | + | 1636 | 90 | 24.5 | -26.9 | NP_944311 | 5' arm 3' arm | ||
| 24145 | + | 11665 | 88 | 24.5 | -22.1 | NP_944325 | 5' arm 3' arm | ||
| 24181 | + | 27276 | 88 | 24 | -21.9 | NP_944347 | 5' arm 3' arm | ||
| 24171 | + | 24221 | 90 | 24 | -20 | NP_944342 | 5' arm 3' arm | ||
| 24324 | - | 44842 | 90 | 24 | -27.8 | NP_944374 | 5' arm 3' arm | ||
| 24140 | + | 10511 | 90 | 24 | -28 | NP_944323 | 5' arm 3' arm | ||
| 24190 | + | 30202 | 89 | 24 | -28.3 | NP_944354 | 5' arm 3' arm | ||
| 24174 | + | 25906 | 89 | 23.5 | -29.2 | NP_944344 | 5' arm 3' arm | ||
| 24203 | + | 35477 | 85 | 23.5 | -28.5 | NP_944360 | 5' arm 3' arm | ||
| 24209 | + | 37586 | 88 | 23.5 | -27.5 | NP_944363 | 5' arm 3' arm | ||
| 24202 | + | 35299 | 90 | 23.5 | -24.3 | NP_944360 | 5' arm 3' arm | ||
| 24134 | + | 8749 | 90 | 23.5 | -22.3 | NP_944321 | 5' arm 3' arm | ||
| 24199 | + | 34032 | 89 | 23.5 | -22.4 | NP_944359 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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