miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27332	+	2271	88	19.5	-28.6	YP_006583		5' arm      3' arm
27333	+	2580	88	19.5	-30.3	YP_006584		5' arm      3' arm
27334	+	3148	90	19.5	-23.9	YP_006584		5' arm      3' arm
27335	+	4423	90	20.5	-23.5	YP_006585		5' arm      3' arm
27336	+	6844	90	20	-25.6	YP_006589		5' arm      3' arm
27337	+	7157	89	21.5	-20.4	YP_006590		5' arm      3' arm
27338	+	8086	83	21	-29.5	YP_006592		5' arm      3' arm
27339	+	9244	81	19	-25.3	YP_006595		5' arm      3' arm
27340	+	10873	87	20.5	-20	YP_006595		5' arm      3' arm
27341	+	13897	87	21	-25.8	YP_006598		5' arm      3' arm
27342	+	16367	88	19.5	-24.2	YP_006601		5' arm      3' arm
27343	+	16544	89	19	-27.2	YP_006601		5' arm      3' arm
27344	+	17316	85	21	-21.7	YP_006601		5' arm      3' arm
27345	+	18621	89	21	-22.7	YP_006601		5' arm      3' arm
27346	+	18771	88	24.5	-23.7	YP_006601		5' arm      3' arm
27347	+	22435	88	20.5	-20.5	YP_006601		5' arm      3' arm
27348	+	22745	90	21	-21.8	YP_006601		5' arm      3' arm
27349	+	25356	88	19.5	-20.5	YP_006601		5' arm      3' arm
27350	+	26735	82	23	-24.29	YP_006604		5' arm      3' arm
27351	+	30084	90	21.5	-20.8	YP_006606		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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