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| GenBank Identifier | RefSeq Acc. | Name |
| 11038431 | NC_001875.2 | Orgyia pseudotsugata multicapsid nucleopolyhedrovirus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 7009 | - | 113357 | 90 | 20 | -20.3 | NP_046290 | 5' arm 3' arm | ||
| 7008 | - | 112136 | 88 | 19 | -25.5 | NP_046288 | 5' arm 3' arm | ||
| 7007 | - | 111267 | 81 | 20 | -26.5 | NP_046287 | 5' arm 3' arm | ||
| 7006 | - | 110616 | 85 | 23.5 | -19.82 | NP_046287 | 5' arm 3' arm | ||
| 7005 | - | 109446 | 88 | 21.5 | -20.5 | NP_046286 | 5' arm 3' arm | ||
| 7004 | - | 108827 | 86 | 22 | -32.9 | NP_046285 | 5' arm 3' arm | ||
| 7003 | - | 104340 | 85 | 22 | -22.7 | NP_046281 | 5' arm 3' arm | ||
| 7002 | - | 104196 | 82 | 22.5 | -23.1 | NP_046281 | 5' arm 3' arm | ||
| 7001 | - | 103161 | 90 | 21 | -22.2 | NP_046280 | 5' arm 3' arm | ||
| 7000 | - | 103038 | 90 | 22.5 | -24.8 | NP_046280 | 5' arm 3' arm | ||
| 6999 | - | 102768 | 83 | 20 | -20 | NP_046280 | 5' arm 3' arm | ||
| 6998 | - | 101733 | 90 | 26 | -22.3 | 5' arm 3' arm | |||
| 6997 | - | 101601 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6996 | - | 101469 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6995 | - | 101337 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6994 | - | 99511 | 88 | 20.5 | -24 | NP_046277 | 5' arm 3' arm | ||
| 6993 | - | 98984 | 90 | 22.5 | -25.6 | NP_046275 | 5' arm 3' arm | ||
| 6992 | - | 98881 | 90 | 19.5 | -23.4 | NP_046275 | 5' arm 3' arm | ||
| 6991 | - | 98683 | 68 | 20 | -23.3 | NP_046275 | 5' arm 3' arm | ||
| 6990 | - | 98028 | 90 | 22 | -32.3 | NP_046275 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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