miRNA display CGI


Results 1 - 20 of 94 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692637 NC_006549.1 Singapore grouper iridovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30636 - 39727 90 25 -19.4 YP_164138 5' arm      3' arm
30649 - 75025 90 19.5 -19.6 YP_164173 5' arm      3' arm
30641 - 51677 87 19.5 -19.6 YP_164152 5' arm      3' arm
30605 + 76676 88 20 -19.6 YP_164176 5' arm      3' arm
30586 + 32975 85 21 -19.7 YP_164132 5' arm      3' arm
30643 - 60540 90 23.5 -19.8 YP_164159 5' arm      3' arm
30592 + 45396 89 19.5 -19.8 YP_164146 5' arm      3' arm
30663 - 119620 90 23 -19.8 YP_164232 5' arm      3' arm
30633 - 21689 84 19.5 -19.8 YP_164121 5' arm      3' arm
30658 - 107564 82 21 -20 YP_164217 5' arm      3' arm
30589 + 37597 88 22 -20.1 YP_164136 5' arm      3' arm
30656 - 102427 90 21.5 -20.1 YP_164207 5' arm      3' arm
30638 - 45235 89 20 -20.3 YP_164146 5' arm      3' arm
30628 - 5176 88 23.5 -20.4 YP_164100 5' arm      3' arm
30651 - 78193 86 19.5 -20.6 YP_164178 5' arm      3' arm
30578 + 3756 89 23 -20.7 YP_164099 5' arm      3' arm
30614 + 105190 90 22 -20.8 YP_164213 5' arm      3' arm
30585 + 29299 90 23.5 -20.92 YP_164128 5' arm      3' arm
30604 + 76220 86 20.5 -21 YP_164176 5' arm      3' arm
30593 + 45854 89 20 -21 YP_164147 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.