miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27555	+	172	90	20	-37.1			5' arm      3' arm
27556	+	1912	90	26	-27.1	YP_024678		5' arm      3' arm
27557	+	2015	90	21	-26	YP_024678		5' arm      3' arm
27558	+	2177	90	20	-20.7	YP_024678		5' arm      3' arm
27559	+	3194	87	19.5	-24.9	YP_024680		5' arm      3' arm
27560	+	3546	90	20.5	-22.8	YP_024681		5' arm      3' arm
27561	+	4081	88	19.5	-21.3	YP_024681		5' arm      3' arm
27562	+	4510	88	19	-24	YP_024681		5' arm      3' arm
27563	+	4684	87	22	-25.6	YP_024682		5' arm      3' arm
27564	+	4889	90	24	-22.8			5' arm      3' arm
27565	+	5078	89	22	-23.2	YP_024682		5' arm      3' arm
27566	+	6622	87	21.5	-31.7	YP_024683		5' arm      3' arm
27567	+	6909	88	21	-26.5	YP_024683		5' arm      3' arm
27568	+	7236	90	19	-25.3	YP_024683		5' arm      3' arm
27569	+	7794	88	21.5	-26.7	YP_024685		5' arm      3' arm
27570	+	7893	88	23	-20.1	YP_024685		5' arm      3' arm
27571	+	8049	90	22.5	-22.8	YP_024686		5' arm      3' arm
27572	+	8599	89	20.5	-21.7	YP_024687		5' arm      3' arm
27573	+	8798	90	20	-20.8	YP_024688		5' arm      3' arm
27574	+	9092	89	22.5	-20.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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