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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27691 | - | 28672 | 89 | 22.5 | -23.1 | YP_024718 | 5' arm 3' arm | ||
| 27584 | + | 14772 | 89 | 22.5 | -23.2 | YP_024701 | 5' arm 3' arm | ||
| 27626 | + | 34510 | 90 | 22.5 | -24.7 | YP_024725 | 5' arm 3' arm | ||
| 27682 | - | 26332 | 90 | 22.5 | -27.9 | YP_024717 | 5' arm 3' arm | ||
| 27668 | - | 21221 | 85 | 22.5 | -26.2 | YP_024708 | 5' arm 3' arm | ||
| 27574 | + | 9092 | 89 | 22.5 | -20.7 | 5' arm 3' arm | |||
| 27663 | - | 17469 | 89 | 22.5 | -32.3 | YP_024703 | 5' arm 3' arm | ||
| 27692 | - | 29067 | 87 | 22.5 | -29.3 | YP_024720 | 5' arm 3' arm | ||
| 27611 | + | 28904 | 89 | 22.5 | -21.2 | YP_024719 | 5' arm 3' arm | ||
| 27613 | + | 30456 | 90 | 22.5 | -29.7 | YP_024721 | 5' arm 3' arm | ||
| 27665 | - | 18717 | 90 | 22.5 | -30.6 | 5' arm 3' arm | |||
| 27571 | + | 8049 | 90 | 22.5 | -22.8 | YP_024686 | 5' arm 3' arm | ||
| 27563 | + | 4684 | 87 | 22 | -25.6 | YP_024682 | 5' arm 3' arm | ||
| 27619 | + | 31558 | 88 | 22 | -22.4 | YP_024723 | 5' arm 3' arm | ||
| 27690 | - | 28583 | 89 | 22 | -21.9 | YP_024718 | 5' arm 3' arm | ||
| 27621 | + | 32226 | 89 | 22 | -23.9 | YP_024723 | 5' arm 3' arm | ||
| 27565 | + | 5078 | 89 | 22 | -23.2 | YP_024682 | 5' arm 3' arm | ||
| 27616 | + | 31025 | 90 | 22 | -21.6 | YP_024722 | 5' arm 3' arm | ||
| 27617 | + | 31120 | 87 | 22 | -22.9 | YP_024722 | 5' arm 3' arm | ||
| 27601 | + | 21975 | 89 | 22 | -23.6 | YP_024710 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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