miRNA display CGI


Results 1 - 20 of 151 are showing below:
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GenBank Identifier RefSeq Acc. Name
48696910 NC_005882.1 Burkholderia cenocepacia phage BcepMu

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27556 + 1912 90 26 -27.1 YP_024678 5' arm      3' arm
27644 - 7207 90 25.5 -22.81 YP_024683 5' arm      3' arm
27583 + 14414 90 25.5 -25.8 YP_024701 5' arm      3' arm
27702 - 33536 90 24.5 -23.7 YP_024725 5' arm      3' arm
27679 - 25608 88 24.5 -22.8 YP_024717 5' arm      3' arm
27635 - 3569 90 24 -24.1 YP_024681 5' arm      3' arm
27564 + 4889 90 24 -22.8 5' arm      3' arm
27579 + 10838 89 24 -24 YP_024692 5' arm      3' arm
27684 - 26770 87 23.5 -25.7 YP_024717 5' arm      3' arm
27578 + 10739 90 23.5 -28.2 YP_024692 5' arm      3' arm
27683 - 26512 86 23.5 -22.8 YP_024717 5' arm      3' arm
27695 - 30070 89 23.5 -22 YP_024720 5' arm      3' arm
27669 - 21342 89 23 -29.8 YP_024708 5' arm      3' arm
27652 - 14128 88 23 -20 YP_024700 5' arm      3' arm
27681 - 26190 90 23 -21.1 YP_024717 5' arm      3' arm
27670 - 21516 90 23 -36.8 YP_024709 5' arm      3' arm
27623 + 32760 89 23 -19.9 YP_024724 5' arm      3' arm
27624 + 33392 90 23 -22.9 YP_024725 5' arm      3' arm
27570 + 7893 88 23 -20.1 YP_024685 5' arm      3' arm
27691 - 28672 89 22.5 -23.1 YP_024718 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.