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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28084 | + | 35626 | 85 | 22 | -35.1 | YP_024959 | 5' arm 3' arm | ||
| 28018 | + | 12325 | 85 | 19 | -34.6 | YP_024935 | 5' arm 3' arm | ||
| 28055 | + | 28203 | 90 | 21 | -33.7 | YP_024950 | 5' arm 3' arm | ||
| 28054 | + | 28053 | 88 | 23.5 | -33.4 | YP_024950 | 5' arm 3' arm | ||
| 28132 | - | 13690 | 87 | 23 | -33.4 | YP_024935 | 5' arm 3' arm | ||
| 28063 | + | 29964 | 88 | 23.5 | -32.2 | YP_024952 | 5' arm 3' arm | ||
| 28153 | - | 24013 | 90 | 21 | -32.2 | YP_024945 | 5' arm 3' arm | ||
| 28039 | + | 22115 | 84 | 20.5 | -31.4 | YP_024940 | 5' arm 3' arm | ||
| 28056 | + | 28331 | 88 | 21.5 | -31.4 | YP_024950 | 5' arm 3' arm | ||
| 28147 | - | 21178 | 90 | 21 | -31.2 | YP_024939 | 5' arm 3' arm | ||
| 28135 | - | 15314 | 87 | 22 | -30.4 | YP_024936 | 5' arm 3' arm | ||
| 28112 | - | 5117 | 90 | 21 | -30.2 | YP_024926 | 5' arm 3' arm | ||
| 28129 | - | 12883 | 90 | 22.5 | -30 | YP_024935 | 5' arm 3' arm | ||
| 28022 | + | 14134 | 89 | 19 | -29.8 | YP_024936 | 5' arm 3' arm | ||
| 28015 | + | 9761 | 86 | 22.5 | -29.7 | YP_024932 | 5' arm 3' arm | ||
| 28066 | + | 30365 | 90 | 22 | -29.5 | YP_024952 | 5' arm 3' arm | ||
| 28053 | + | 27562 | 89 | 20.5 | -29 | YP_024949 | 5' arm 3' arm | ||
| 28092 | + | 38198 | 90 | 20.5 | -28.9 | YP_024963 | 5' arm 3' arm | ||
| 28078 | + | 34090 | 89 | 21.5 | -28.7 | YP_024957 | 5' arm 3' arm | ||
| 28033 | + | 18980 | 90 | 20.5 | -28.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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