miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28157	-	25002	86	19	-20.6	YP_024945		5' arm      3' arm
28032	+	18146	88	19	-26	YP_024937		5' arm      3' arm
28018	+	12325	85	19	-34.6	YP_024935		5' arm      3' arm
28026	+	15399	88	19	-19.6	YP_024936		5' arm      3' arm
28010	+	7954	90	19	-20.5	YP_024931		5' arm      3' arm
28180	-	40823	88	19	-23.5	YP_024966		5' arm      3' arm
28022	+	14134	89	19	-29.8	YP_024936		5' arm      3' arm
28091	+	38098	89	19	-20.5			5' arm      3' arm
28038	+	21964	86	19	-21.8	YP_024939		5' arm      3' arm
28000	+	1937	88	19	-22.1	YP_024923		5' arm      3' arm
28158	-	26036	89	19	-24.1			5' arm      3' arm
28164	-	29010	85	19	-21.1	YP_024951		5' arm      3' arm
28065	+	30189	90	19	-20.5	YP_024952		5' arm      3' arm
28064	+	30065	81	19	-24.4	YP_024952		5' arm      3' arm
28174	-	34690	89	19	-19.9	YP_024958		5' arm      3' arm
28052	+	26993	86	19	-24.8	YP_024948		5' arm      3' arm
28047	+	24853	89	19	-26.9	YP_024945		5' arm      3' arm
28020	+	13833	90	19	-23.7	YP_024935		5' arm      3' arm
28068	+	30830	90	19.5	-21	YP_024952		5' arm      3' arm
28071	+	31569	90	19.5	-21.9	YP_024953		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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