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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28030 | + | 17778 | 89 | 24.5 | -22 | YP_024937 | 5' arm 3' arm | ||
| 28090 | + | 37877 | 90 | 24.5 | -25 | 5' arm 3' arm | |||
| 28145 | - | 18959 | 90 | 24.5 | -23.7 | YP_024937 | 5' arm 3' arm | ||
| 28017 | + | 10946 | 90 | 24.5 | -25.3 | YP_024933 | 5' arm 3' arm | ||
| 28061 | + | 29259 | 87 | 24.5 | -27 | 5' arm 3' arm | |||
| 28050 | + | 26346 | 89 | 24.5 | -27.7 | YP_024948 | 5' arm 3' arm | ||
| 28105 | - | 2797 | 90 | 24 | -24.1 | 5' arm 3' arm | |||
| 28008 | + | 5881 | 90 | 24 | -24.5 | YP_024927 | 5' arm 3' arm | ||
| 28138 | - | 16231 | 86 | 24 | -25.1 | YP_024936 | 5' arm 3' arm | ||
| 28117 | - | 6618 | 90 | 24 | -24.1 | YP_024928 | 5' arm 3' arm | ||
| 28104 | - | 1711 | 87 | 23.5 | -26.8 | YP_024923 | 5' arm 3' arm | ||
| 28082 | + | 35260 | 88 | 23.5 | -21.7 | YP_024959 | 5' arm 3' arm | ||
| 28079 | + | 34282 | 88 | 23.5 | -24.1 | 5' arm 3' arm | |||
| 28165 | - | 29345 | 87 | 23.5 | -23.2 | 5' arm 3' arm | |||
| 28041 | + | 22467 | 89 | 23.5 | -20.1 | YP_024941 | 5' arm 3' arm | ||
| 28054 | + | 28053 | 88 | 23.5 | -33.4 | YP_024950 | 5' arm 3' arm | ||
| 28140 | - | 16662 | 90 | 23.5 | -25.8 | YP_024937 | 5' arm 3' arm | ||
| 28063 | + | 29964 | 88 | 23.5 | -32.2 | YP_024952 | 5' arm 3' arm | ||
| 28077 | + | 33859 | 89 | 23 | -25.9 | YP_024957 | 5' arm 3' arm | ||
| 28102 | + | 42166 | 87 | 23 | -27.1 | YP_024966 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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