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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28168 | - | 31338 | 90 | 20 | -24.9 | YP_024952 | 5' arm 3' arm | ||
| 28063 | + | 29964 | 88 | 23.5 | -32.2 | YP_024952 | 5' arm 3' arm | ||
| 28070 | + | 31303 | 89 | 22.5 | -24.8 | YP_024952 | 5' arm 3' arm | ||
| 28166 | - | 30153 | 88 | 23 | -24.4 | YP_024952 | 5' arm 3' arm | ||
| 28068 | + | 30830 | 90 | 19.5 | -21 | YP_024952 | 5' arm 3' arm | ||
| 28062 | + | 29772 | 90 | 21.5 | -24.7 | YP_024952 | 5' arm 3' arm | ||
| 28065 | + | 30189 | 90 | 19 | -20.5 | YP_024952 | 5' arm 3' arm | ||
| 28067 | + | 30545 | 90 | 19.5 | -24.6 | YP_024952 | 5' arm 3' arm | ||
| 28064 | + | 30065 | 81 | 19 | -24.4 | YP_024952 | 5' arm 3' arm | ||
| 28069 | + | 30928 | 90 | 22 | -25.8 | YP_024952 | 5' arm 3' arm | ||
| 28058 | + | 28733 | 85 | 19.5 | -22.6 | YP_024951 | 5' arm 3' arm | ||
| 28060 | + | 28999 | 86 | 22 | -20.5 | YP_024951 | 5' arm 3' arm | ||
| 28059 | + | 28901 | 90 | 20 | -19.4 | YP_024951 | 5' arm 3' arm | ||
| 28164 | - | 29010 | 85 | 19 | -21.1 | YP_024951 | 5' arm 3' arm | ||
| 28055 | + | 28203 | 90 | 21 | -33.7 | YP_024950 | 5' arm 3' arm | ||
| 28162 | - | 28251 | 88 | 20.5 | -22.7 | YP_024950 | 5' arm 3' arm | ||
| 28056 | + | 28331 | 88 | 21.5 | -31.4 | YP_024950 | 5' arm 3' arm | ||
| 28054 | + | 28053 | 88 | 23.5 | -33.4 | YP_024950 | 5' arm 3' arm | ||
| 28057 | + | 28571 | 89 | 19.5 | -22.5 | YP_024950 | 5' arm 3' arm | ||
| 28163 | - | 28464 | 90 | 21.5 | -24.9 | YP_024950 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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