miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
62327168 NC_006938.1 Bacteriophage phi JL001

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31733 + 17638 89 20.5 -29 YP_223952 5' arm      3' arm
31734 + 19566 86 20 -21.7 YP_223954 5' arm      3' arm
31735 + 19880 89 19 -22.7 YP_223954 5' arm      3' arm
31736 + 20187 90 21.5 -26 YP_223954 5' arm      3' arm
31737 + 21589 88 21 -28.46 YP_223957 5' arm      3' arm
31738 + 23037 90 19.5 -19.4 YP_223957 5' arm      3' arm
31739 + 23253 90 19.5 -22.2 YP_223957 5' arm      3' arm
31740 + 24416 90 19.5 -24.5 YP_223961 5' arm      3' arm
31741 + 24724 87 19.5 -24.7 YP_223961 5' arm      3' arm
31742 + 24914 90 22.5 -22.6 YP_223962 5' arm      3' arm
31743 + 25748 89 20 -20.6 YP_223965 5' arm      3' arm
31744 + 26288 89 21.5 -20.5 YP_223967 5' arm      3' arm
31745 + 28036 87 19.5 -30.9 YP_223971 5' arm      3' arm
31746 + 28663 88 20 -22.6 YP_223974 5' arm      3' arm
31747 + 30132 90 19.5 -30.3 YP_223979 5' arm      3' arm
31748 + 30795 89 19.5 -25.5 YP_223981 5' arm      3' arm
31749 + 31338 88 23 -26.8 5' arm      3' arm
31750 + 31827 87 19 -20 YP_223982 5' arm      3' arm
31751 + 32216 90 19.5 -19.9 YP_223983 5' arm      3' arm
31752 + 32498 88 20 -20.3 YP_223983 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.