miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27920	+	1968	80	19.5	-27.6	YP_024911		5' arm      3' arm
27921	+	6031	89	19.5	-24.1	YP_024914		5' arm      3' arm
27922	+	7565	88	25	-19.7	YP_024917		5' arm      3' arm
27923	+	11739	89	21.5	-25.2	YP_024864		5' arm      3' arm
27924	+	13114	89	22	-26.1	YP_024865		5' arm      3' arm
27925	+	13606	90	23	-23.6	YP_024865		5' arm      3' arm
27926	+	14893	85	22	-21.3	YP_024868		5' arm      3' arm
27927	+	15040	90	23	-26	YP_024868		5' arm      3' arm
27928	+	16218	90	23.5	-21.7	YP_024871		5' arm      3' arm
27929	+	16699	90	20	-25.9	YP_024871		5' arm      3' arm
27930	+	17623	90	22.5	-23.8	YP_024872		5' arm      3' arm
27931	+	18201	90	22	-19.5	YP_024873		5' arm      3' arm
27932	+	20406	89	21.5	-26.4	YP_024874		5' arm      3' arm
27933	+	20904	87	22	-27.9	YP_024875		5' arm      3' arm
27934	+	21220	90	20.5	-23.2	YP_024875		5' arm      3' arm
27935	+	22035	89	21	-23.2	YP_024875		5' arm      3' arm
27936	+	22526	81	22.5	-23.02	YP_291177		5' arm      3' arm
27937	+	24138	90	19.5	-19.4	YP_024878		5' arm      3' arm
27938	+	25682	90	20	-23.3	YP_024895		5' arm      3' arm
27939	+	27209	87	20	-22.8	YP_024883		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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