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GenBank Identifier | RefSeq Acc. | Name |
20198505 | NC_002512.2 | Murid herpesvirus 2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
9356 | - | 150095 | 89 | 19 | -21.4 | NP_064210 | 5' arm 3' arm | ||
9372 | - | 187904 | 89 | 20 | -22.7 | NP_064245 | 5' arm 3' arm | ||
9385 | - | 221032 | 88 | 21.5 | -22.1 | NP_064271 | 5' arm 3' arm | ||
9355 | - | 149332 | 89 | 22 | -27.3 | NP_064209 | 5' arm 3' arm | ||
9388 | - | 226264 | 90 | 19 | -21.8 | NP_064275 | 5' arm 3' arm | ||
9334 | - | 127632 | 90 | 19 | -24.9 | NP_064197 | 5' arm 3' arm | ||
9384 | - | 203872 | 87 | 24.5 | -24.9 | NP_064257 | 5' arm 3' arm | ||
9336 | - | 128839 | 90 | 20 | -21 | NP_064196 | 5' arm 3' arm | ||
9332 | - | 126799 | 87 | 21.5 | -26.9 | NP_064195 | 5' arm 3' arm | ||
9343 | - | 133256 | 87 | 20 | -21.8 | NP_064201 | 5' arm 3' arm | ||
9349 | - | 139169 | 90 | 19 | -24.1 | NP_064205 | 5' arm 3' arm | ||
9352 | - | 141764 | 82 | 19.5 | -23.2 | NP_064205 | 5' arm 3' arm | ||
9351 | - | 141076 | 89 | 20.5 | -22.8 | NP_064205 | 5' arm 3' arm | ||
9361 | - | 156383 | 90 | 19.5 | -26.9 | NP_064216 | 5' arm | ||
9362 | - | 165979 | 89 | 22 | -20.1 | NP_064226 | 5' arm 3' arm | ||
9365 | - | 175938 | 89 | 22.5 | -19.9 | NP_064236 | 5' arm 3' arm | ||
9368 | - | 183428 | 89 | 23.5 | -21.3 | NP_064241 | 5' arm 3' arm | ||
9375 | - | 191824 | 88 | 19 | -24.2 | NP_064247 | 5' arm 3' arm | ||
9376 | - | 194245 | 89 | 20 | -21.3 | NP_064249 | 5' arm 3' arm | ||
9381 | - | 197068 | 89 | 23.5 | -21.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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