miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7161	+	2176	87	21.5	-32.4	NP_046821		5' arm      3' arm
7162	+	2366	90	22.5	-31.9	NP_046822		5' arm      3' arm
7163	+	3356	90	19.5	-20.1	NP_046824		5' arm      3' arm
7164	+	3500	88	20	-25	NP_046824		5' arm      3' arm
7165	+	4449	89	22	-23.5			5' arm      3' arm
7166	+	5563	87	21	-25.8	NP_046825		5' arm      3' arm
7167	+	6690	90	19	-23.9	NP_046827		5' arm      3' arm
7168	+	7358	87	20.5	-34.1	NP_046828		5' arm      3' arm
7169	+	7499	89	20	-24.5	NP_046828		5' arm      3' arm
7170	+	7920	90	19	-20.86	NP_046828		5' arm      3' arm
7171	+	8552	90	21	-24.2	NP_046828		5' arm      3' arm
7172	+	9343	87	21	-31.1	NP_046829		5' arm      3' arm
7173	+	9783	87	20.5	-20.4	NP_046829		5' arm      3' arm
7174	+	10725	82	20	-24.7	NP_046830		5' arm      3' arm
7175	+	11042	90	20.5	-25.4	NP_046830		5' arm      3' arm
7176	+	11925	81	19	-20.6	NP_046831		5' arm      3' arm
7177	+	12235	88	19	-31.2	NP_046832		5' arm      3' arm
7178	+	12550	87	19.5	-23.9	NP_046832		5' arm      3' arm
7179	+	12795	87	22.5	-23.91	NP_046832		5' arm      3' arm
7180	+	13358	90	21	-24	NP_046834		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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