miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7181	+	13720	86	19.5	-21.5	NP_046835		5' arm      3' arm
7182	+	15382	89	19	-23.2	NP_046839		5' arm      3' arm
7183	+	16207	90	19	-24	NP_046841		5' arm      3' arm
7184	+	17504	90	23	-20.4	NP_046842		5' arm      3' arm
7185	+	17740	87	20	-21.9	NP_046842		5' arm      3' arm
7186	+	18254	89	23	-22.3	NP_046842		5' arm      3' arm
7187	+	18412	88	19.5	-20.5	NP_046842		5' arm      3' arm
7188	+	19297	89	21.5	-22	NP_046843		5' arm      3' arm
7189	+	20807	86	19.5	-22.4	NP_046844		5' arm      3' arm
7190	+	20969	89	19	-28.9	NP_046844		5' arm      3' arm
7191	+	21230	89	22	-25.3	NP_046844		5' arm      3' arm
7192	+	21614	83	20	-23.5			5' arm      3' arm
7193	+	21922	90	21	-22.6	NP_046845		5' arm      3' arm
7194	+	22607	89	22.5	-21	NP_046847		5' arm      3' arm
7195	+	23175	78	19.5	-25.8	NP_046847		5' arm      3' arm
7196	+	23587	89	20.5	-23	NP_046847		5' arm      3' arm
7197	+	23678	87	21	-19.6	NP_046847		5' arm      3' arm
7198	+	24977	89	21.5	-24.5	NP_046848		5' arm      3' arm
7199	+	25658	90	19	-25.7	NP_046850		5' arm      3' arm
7200	+	26181	90	20	-21	NP_046850		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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