miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7227	+	38568	81	21	-29.2	NP_046873		5' arm      3' arm
7356	-	40842	84	21	-29	NP_046878		5' arm      3' arm
7190	+	20969	89	19	-28.9	NP_046844		5' arm      3' arm
7239	+	43886	90	20.5	-28.9	NP_046886		5' arm      3' arm
7307	-	18435	89	22	-28.5	NP_046842		5' arm      3' arm
7355	-	40509	89	20.5	-28.4	NP_046877		5' arm      3' arm
7205	+	27708	90	20.5	-28.1	NP_046853		5' arm      3' arm
7263	-	2707	90	19	-28.1			5' arm      3' arm
7336	-	30567	87	19.5	-28.1	NP_046860		5' arm      3' arm
7315	-	22789	88	21	-28	NP_046847		5' arm      3' arm
7246	+	47022	87	20	-28	NP_046894		5' arm      3' arm
7212	+	31593	84	19.5	-27.7	NP_046862		5' arm      3' arm
7285	-	9327	86	24.5	-27.6	NP_046829		5' arm      3' arm
7209	+	30844	89	19.5	-27.6	NP_046860		5' arm      3' arm
7364	-	43895	90	19	-27.5	NP_046886		5' arm      3' arm
7269	-	4020	89	21.5	-27.1	NP_046824		5' arm      3' arm
7332	-	29433	90	22.5	-27	NP_046860		5' arm      3' arm
7272	-	5731	90	20	-26.9	NP_046825		5' arm      3' arm
7339	-	33761	90	19.5	-26.8	NP_046865		5' arm      3' arm
7210	+	30965	87	20	-26.8	NP_046860		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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