miRNA display CGI


Results 1 - 20 of 208 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630386 NC_001900.1 Mycobacteriophage D29

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7258 - 1596 87 22.5 -36.5 NP_046820 5' arm      3' arm
7326 - 26894 90 21 -35.3 5' arm      3' arm
7168 + 7358 87 20.5 -34.1 NP_046828 5' arm      3' arm
7320 - 23920 90 19 -33.6 NP_046847 5' arm      3' arm
7161 + 2176 87 21.5 -32.4 NP_046821 5' arm      3' arm
7252 + 48978 90 23 -32.1 5' arm      3' arm
7254 - 375 82 21.5 -32 5' arm      3' arm
7162 + 2366 90 22.5 -31.9 NP_046822 5' arm      3' arm
7177 + 12235 88 19 -31.2 NP_046832 5' arm      3' arm
7172 + 9343 87 21 -31.1 NP_046829 5' arm      3' arm
7311 - 20820 84 22.5 -31.1 NP_046844 5' arm      3' arm
7218 + 33674 85 22.5 -30.9 NP_046865 5' arm      3' arm
7251 + 48862 88 28 -30.6 5' arm      3' arm
7352 - 39026 88 19 -30.5 NP_046874 5' arm      3' arm
7281 - 8232 86 24 -30.3 NP_046828 5' arm      3' arm
7330 - 28904 89 22 -30.3 NP_046857 5' arm      3' arm
7316 - 22975 90 20 -30.1 NP_046847 5' arm      3' arm
7265 - 3014 89 22.5 -29.71 NP_046823 5' arm      3' arm
7342 - 34783 89 22.5 -29.5 NP_046865 5' arm      3' arm
7230 + 41129 88 20.5 -29.4 NP_046880 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.