miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7319	-	23575	90	23	-20.5	NP_046847		5' arm      3' arm
7187	+	18412	88	19.5	-20.5	NP_046842		5' arm      3' arm
7176	+	11925	81	19	-20.6	NP_046831		5' arm      3' arm
7207	+	28385	88	20.5	-20.6	NP_046855		5' arm      3' arm
7250	+	48414	89	22.5	-20.7			5' arm      3' arm
7276	-	6801	87	20	-20.8	NP_046827		5' arm      3' arm
7347	-	37118	90	20	-20.8	NP_046870		5' arm      3' arm
7299	-	13775	90	23	-20.8	NP_046835		5' arm      3' arm
7267	-	3445	90	19	-20.8	NP_046824		5' arm      3' arm
7216	+	32796	90	20.5	-20.8			5' arm      3' arm
7354	-	40056	90	21.5	-20.8	NP_046877		5' arm      3' arm
7170	+	7920	90	19	-20.86	NP_046828		5' arm      3' arm
7215	+	32371	89	21.5	-20.9	NP_046863		5' arm      3' arm
7194	+	22607	89	22.5	-21	NP_046847		5' arm      3' arm
7228	+	39421	89	21.5	-21	NP_046875		5' arm      3' arm
7200	+	26181	90	20	-21	NP_046850		5' arm      3' arm
7206	+	28210	90	20	-21.1	NP_046855		5' arm      3' arm
7232	+	41593	90	21	-21.1	NP_046881		5' arm      3' arm
7322	-	24559	89	20.5	-21.1	NP_046848		5' arm      3' arm
7249	+	48295	89	22.5	-21.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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