miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32340	-	9752	89	24	-19.7	YP_239279		5' arm      3' arm
32303	+	8695	90	20.5	-19.6	YP_239278		5' arm      3' arm
32338	-	8554	85	19.5	-19.8	YP_239278		5' arm      3' arm
32339	-	8685	90	24	-22.9	YP_239278		3' arm
32302	+	8596	90	19.5	-20.8	YP_239278		5' arm      3' arm
32304	+	9082	89	19	-23.6	YP_239278		5' arm      3' arm
32299	+	6871	87	20.5	-19.7	YP_239276		5' arm      3' arm
32300	+	7123	84	21	-23.7	YP_239276		5' arm      3' arm
32336	-	3938	77	21	-24	YP_239273		5' arm      3' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32332	-	2353	90	20	-23.3	YP_239272		5' arm      3' arm
32335	-	3259	90	22	-21.4	YP_239272		5' arm      3' arm
32333	-	2603	88	20.5	-19.7	YP_239272		5' arm
32334	-	3085	89	19.5	-20	YP_239272		5' arm      3' arm
32295	+	260	90	22	-25.8	YP_239269		5' arm      3' arm
32348	-	26404	90	19.5	-27			5' arm      3' arm
32350	-	31456	86	19.5	-25.4			5' arm      3' arm
32351	-	35061	90	22	-36.42			5' arm      3' arm
32323	+	34974	89	24.5	-34.7			5' arm      3' arm
32324	+	37320	89	25.5	-31.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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