miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32336	-	3938	77	21	-24	YP_239273		5' arm      3' arm
32341	-	12026	90	25	-24.1	YP_239284		5' arm      3' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32349	-	28921	90	22.5	-24.6	YP_239301		5' arm      3' arm
32309	+	17095	89	22	-24.6	YP_239289		5' arm      3' arm
32350	-	31456	86	19.5	-25.4			5' arm      3' arm
32301	+	8166	88	19.5	-25.4			5' arm      3' arm
32318	+	27914	88	23	-25.6	YP_239300		5' arm      3' arm
32316	+	25530	90	22.5	-25.6	YP_239297		5' arm      3' arm
32311	+	17872	90	23	-25.7	YP_239291		5' arm      3' arm
32319	+	30925	79	23.5	-25.7	YP_239305		5' arm      3' arm
32295	+	260	90	22	-25.8	YP_239269		5' arm      3' arm
32327	+	43035	90	20	-25.9	YP_239316		5' arm      3' arm
32321	+	33927	86	22.5	-26.5	YP_239308		5' arm      3' arm
32296	+	1448	89	20.5	-26.6			5' arm      3' arm
32348	-	26404	90	19.5	-27			5' arm      3' arm
32328	+	43281	89	21	-28.4			5' arm      3' arm
32306	+	12805	89	20.5	-28.9			5' arm      3' arm
32358	-	47342	85	20.5	-28.9	YP_239326		5' arm      3' arm
32353	-	40176	86	22.5	-29.1	YP_239314		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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