miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32299	+	6871	87	20.5	-19.7	YP_239276		5' arm      3' arm
32300	+	7123	84	21	-23.7	YP_239276		5' arm      3' arm
32297	+	2107	89	19	-23.2			5' arm      3' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32296	+	1448	89	20.5	-26.6			5' arm      3' arm
32310	+	17731	85	21	-20.1	YP_239291		5' arm      3' arm
32307	+	14055	82	20.5	-19.8	YP_239287		5' arm      3' arm
32322	+	34244	89	19.5	-21	YP_239308		5' arm      3' arm
32320	+	33405	90	19.5	-30.1	YP_239307		5' arm      3' arm
32321	+	33927	86	22.5	-26.5	YP_239308		5' arm      3' arm
32323	+	34974	89	24.5	-34.7			5' arm      3' arm
32318	+	27914	88	23	-25.6	YP_239300		5' arm      3' arm
32319	+	30925	79	23.5	-25.7	YP_239305		5' arm      3' arm
32317	+	26543	89	22	-19.9	YP_239298		5' arm      3' arm
32316	+	25530	90	22.5	-25.6	YP_239297		5' arm      3' arm
32315	+	22886	90	20	-20.7	YP_239292		5' arm      3' arm
32312	+	21895	87	21	-22.5	YP_239292		5' arm      3' arm
32313	+	22003	88	21.5	-22.6	YP_239292		5' arm      3' arm
32314	+	22712	90	22.5	-21.09	YP_239292		5' arm      3' arm
32308	+	14568	86	20.5	-21.7	YP_239287		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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