miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23852	-	127576	90	22	-37.3	NP_954963		5' arm      3' arm
23679	+	115437	90	22	-37.3	NP_954954		5' arm      3' arm
23815	-	96382	90	22.5	-34.7	NP_954943		5' arm      3' arm
23567	+	14806	87	23	-34.3	NP_954901		5' arm      3' arm
23611	+	53704	90	22.5	-34	NP_954918		5' arm      3' arm
23561	+	8994	90	19.5	-33.8	NP_954897		5' arm      3' arm
23659	+	96261	88	20.5	-33.6	NP_954943		5' arm      3' arm
23668	+	102748	90	24	-33.6			5' arm      3' arm
23696	+	127487	90	20.5	-33.3	NP_954963		5' arm      3' arm
23833	-	115526	90	20.5	-33.3	NP_954954		5' arm      3' arm
23625	+	65200	88	23	-33.2	NP_954925		5' arm      3' arm
23812	-	93718	89	24.5	-32.6	NP_954942		5' arm      3' arm
23823	-	101068	90	20	-32.5	NP_954949		5' arm      3' arm
23820	-	98582	90	22.5	-32.5	NP_954944		5' arm      3' arm
23573	+	21289	74	19.5	-32.4	NP_954905		5' arm      3' arm
23584	+	27194	89	20.5	-31.5	NP_954909		5' arm      3' arm
23559	+	6188	89	22.5	-31.3	NP_954895		5' arm      3' arm
23756	-	49047	90	24	-31.2	NP_954917		5' arm      3' arm
23807	-	90568	88	19	-31	NP_954940		5' arm      3' arm
23605	+	51312	90	24	-30.9	NP_954918		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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