miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23843	-	120479	90	19	-22.9	NP_954958		5' arm      3' arm
23563	+	11492	87	19	-20.6	NP_954900		5' arm      3' arm
23804	-	87979	89	19	-29.5	NP_954939		5' arm      3' arm
23727	-	22077	88	19	-21.7	NP_954906		5' arm      3' arm
23822	-	100337	89	19	-26.2	NP_954947		5' arm      3' arm
23773	-	66652	90	19	-25.3	NP_954926		5' arm      3' arm
23744	-	27985	88	19	-24.3	NP_954909		5' arm      3' arm
23649	+	88523	87	19	-21.7	NP_954939		5' arm      3' arm
23655	+	93775	79	19	-23.4	NP_954942		5' arm      3' arm
23777	-	68679	89	19	-24.6	NP_954927		5' arm      3' arm
23602	+	47437	90	19	-20.4	NP_954917		5' arm      3' arm
23673	+	104142	88	19	-21	NP_954951		5' arm      3' arm
23758	-	52030	89	19	-23.1	NP_954918		5' arm      3' arm
23824	-	104229	88	19	-24.7	NP_954951		5' arm      3' arm
23749	-	42989	89	19	-19.8	NP_954913		5' arm      3' arm
23571	+	16219	89	19	-20.5	NP_954902		5' arm      3' arm
23568	+	15540	88	19.5	-22.6	NP_954902		5' arm      3' arm
23609	+	52565	85	19.5	-21.7	NP_954918		5' arm      3' arm
23606	+	51522	82	19.5	-21.2	NP_954918		5' arm      3' arm
23794	-	81652	87	19.5	-24.8	NP_954931		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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