miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23844	-	120860	80	23.5	-29.4	NP_954958		5' arm      3' arm
23761	-	55713	87	23.5	-26.3	NP_954919		5' arm      3' arm
23857	-	131804	88	23.5	-21.4			5' arm      3' arm
23656	+	95247	87	23.5	-21.9	NP_954942		5' arm      3' arm
23803	-	86081	90	23.5	-28.5	NP_954937		5' arm      3' arm
23627	+	70600	90	23.5	-28.9	NP_954928		5' arm      3' arm
23616	+	57804	90	23.5	-26.7	NP_954920		5' arm      3' arm
23740	-	26568	89	23.5	-30.3	NP_954908		5' arm      3' arm
23725	-	21834	90	23	-22.3	NP_954906		5' arm      3' arm
23634	+	73626	88	23	-29.6	NP_954929
23631	+	72600	90	23	-28.8	NP_954929
23853	-	128030	86	23	-28	NP_954963		5' arm      3' arm
23567	+	14806	87	23	-34.3	NP_954901		5' arm      3' arm
23814	-	95134	90	23	-22.7	NP_954942		5' arm      3' arm
23625	+	65200	88	23	-33.2	NP_954925		5' arm      3' arm
23628	+	71392	90	23	-25.1	NP_954929
23687	+	119923	90	23	-28.8	NP_954958		5' arm      3' arm
23588	+	31032	90	23	-27.1	NP_954910		5' arm      3' arm
23678	+	114983	86	23	-28	NP_954954		5' arm      3' arm
23648	+	88137	90	23	-20.8	NP_954939		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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