miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23606	+	51522	82	19.5	-21.2	NP_954918		5' arm      3' arm
23604	+	50521	87	20.5	-21.2	NP_954918		5' arm      3' arm
23746	-	29613	90	24	-21.2	NP_954910		5' arm      3' arm
23798	-	83812	89	21	-21.2	NP_954935		5' arm      3' arm
23806	-	88994	90	19.5	-21.2	NP_954939		5' arm      3' arm
23783	-	72864	90	22.5	-21.3	NP_954929		5' arm      3' arm
23557	+	2663	87	21.5	-21.4	NP_954893		5' arm      3' arm
23857	-	131804	88	23.5	-21.4			5' arm      3' arm
23617	+	57966	90	20.5	-21.4	NP_954920		5' arm      3' arm
23674	+	111209	88	23.5	-21.4			5' arm      3' arm
23697	+	127661	90	20	-21.5	NP_954954		5' arm      3' arm
23832	-	115352	90	20	-21.5	NP_954963		5' arm      3' arm
23793	-	81537	89	19.5	-21.5	NP_954931		5' arm      3' arm
23848	-	124952	90	20	-21.5	NP_954961		5' arm      3' arm
23788	-	75654	89	21	-21.5	NP_954930		5' arm      3' arm
23766	-	58016	90	20	-21.6	NP_954920		5' arm      3' arm
23626	+	69360	88	20	-21.6	NP_954927
23768	-	59761	90	19.5	-21.6			5' arm      3' arm
23727	-	22077	88	19	-21.7	NP_954906		5' arm      3' arm
23609	+	52565	85	19.5	-21.7	NP_954918		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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