miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23824	-	104229	88	19	-24.7	NP_954951		5' arm      3' arm
23840	-	119566	89	22.5	-24.7			5' arm      3' arm
23854	-	129683	86	22	-21			5' arm      3' arm
23825	-	105504	84	22	-19.4			5' arm      3' arm
23855	-	129798	86	22.5	-22.1			5' arm      3' arm
23801	-	85839	90	20	-22.3	NP_954936		5' arm      3' arm
23853	-	128030	86	23	-28	NP_954963		5' arm      3' arm
23803	-	86081	90	23.5	-28.5	NP_954937		5' arm      3' arm
23809	-	92805	89	20	-25.1	NP_954941		5' arm      3' arm
23813	-	93957	88	20.5	-27.1	NP_954942		5' arm      3' arm
23818	-	97404	90	21	-22.2	NP_954943		5' arm      3' arm
23822	-	100337	89	19	-26.2	NP_954947		5' arm      3' arm
23821	-	100161	88	21	-27.1	NP_954947		5' arm      3' arm
23827	-	112051	85	20.5	-26.8			5' arm      3' arm
23828	-	113300	86	25.5	-26.3			5' arm      3' arm
23833	-	115526	90	20.5	-33.3	NP_954954		5' arm      3' arm
23834	-	116249	90	22.5	-24.4			5' arm      3' arm
23846	-	123579	89	20	-27	NP_954960		5' arm      3' arm
23847	-	123716	90	23	-22.4	NP_954960		5' arm      3' arm
23850	-	125953	84	21.5	-21.9	NP_954962		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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