miRNA display CGI


Results 1 - 20 of 126 are showing below:
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GenBank Identifier RefSeq Acc. Name
17313217 NC_003278.1 Bacteriophage phi CTX

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11909 + 625 90 21 -23.7 NP_490598 5' arm      3' arm
11910 + 1255 89 22.5 -33 5' arm      3' arm
11911 + 1869 87 23.5 -20.1 NP_490599 5' arm      3' arm
11912 + 2799 87 19.5 -30.7 NP_490600 5' arm      3' arm
11913 + 3215 89 22.5 -22.2 NP_490600 5' arm      3' arm
11914 + 3884 90 22 -26.5 NP_490600 5' arm      3' arm
11915 + 4187 90 21 -22 NP_490600 5' arm      3' arm
11916 + 5918 90 20.5 -22.72 NP_490602 5' arm      3' arm
11917 + 6481 88 20.5 -25.2 NP_490603 5' arm      3' arm
11918 + 7153 84 20 -21.6 NP_490604 5' arm      3' arm
11919 + 8675 90 19.5 -24.6 NP_490609 5' arm      3' arm
11920 + 9200 89 21 -24.6 NP_490609 5' arm      3' arm
11921 + 10077 90 19 -28.4 NP_490612 5' arm      3' arm
11922 + 10447 88 19.5 -21.7 NP_490613 5' arm      3' arm
11923 + 10690 87 20 -22.6 NP_490613 5' arm      3' arm
11924 + 13131 80 21.5 -28.1 NP_490617 5' arm      3' arm
11925 + 13378 90 19.5 -25.9 NP_490617 5' arm      3' arm
11926 + 14367 89 20 -21.6 NP_490619 5' arm      3' arm
11927 + 15708 90 20 -23.7 NP_490619 5' arm      3' arm
11928 + 16145 89 22 -20.2 NP_490619 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.