miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
3500	+	2313	90	21.5	-20	NP_054033		5' arm      3' arm
3501	+	5822	90	24	-21.3	NP_054038		5' arm      3' arm
3502	+	16411	80	22	-24.6	NP_054050		5' arm      3' arm
3503	+	17645	80	20.5	-21.2	NP_054051		5' arm      3' arm
3504	+	25716	90	27	-19.6			5' arm      3' arm
3505	+	66686	90	25.5	-20.9	NP_054110		5' arm      3' arm
3506	+	87735	90	19.5	-23.9	NP_054131		5' arm      3' arm
3507	+	88272	90	23	-23.5	NP_054132		5' arm      3' arm
3508	+	93426	89	22.5	-20.7			5' arm      3' arm
3509	+	95577	89	19	-21.6	NP_054139		5' arm      3' arm
3510	+	101300	85	19.5	-22.3	NP_054149		5' arm      3' arm
3511	+	101544	89	21	-19.6	NP_054149		5' arm      3' arm
3512	+	108540	87	20	-24.2	NP_054158		5' arm      3' arm
3513	+	115008	87	20	-25.4	NP_054164		5' arm      3' arm
3514	+	120255	89	23.5	-20.6	NP_054168		5' arm      3' arm
3515	+	122329	89	21.5	-20.4	NP_054169		5' arm      3' arm
3516	+	122740	89	20	-22.9	NP_054170		5' arm      3' arm
3517	+	131996	88	20.5	-30.6	NP_054182		5' arm      3' arm
3518	-	30318	89	19	-27.1	NP_054066		5' arm      3' arm
3519	-	34221	89	20.5	-25.1	NP_054071		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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