miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29203	+	116157	90	20	-20.6	YP_068212		5' arm      3' arm
29204	+	117169	90	22	-21.24	YP_068211		5' arm      3' arm
29205	+	117265	87	19.5	-22.1	YP_068211		5' arm      3' arm
29206	+	117667	89	21.5	-28.6	YP_068211		5' arm      3' arm
29207	+	117975	90	24	-22.4	YP_068214		5' arm      3' arm
29208	+	119359	89	23	-24.3	YP_068211		5' arm      3' arm
29209	+	119972	90	21	-23.5	YP_068215		5' arm      3' arm
29210	+	123627	90	19	-22.4			5' arm      3' arm
29211	+	124889	87	22	-21			5' arm      3' arm
29212	+	125039	90	22.5	-26			5' arm      3' arm
29213	+	125323	90	19.5	-20.3			5' arm      3' arm
29214	+	125773	79	19	-23.7	YP_068219		5' arm      3' arm
29215	+	126572	90	20	-21.5	YP_068219		5' arm      3' arm
29216	+	126759	87	19	-23.8	YP_068219		5' arm      3' arm
29217	+	127449	89	19	-20.6	YP_068220		5' arm      3' arm
29218	+	128593	89	22	-21			5' arm      3' arm
29219	+	128683	89	20	-20.9			5' arm      3' arm
29220	+	128998	90	22	-23.26	YP_068221		5' arm      3' arm
29221	+	130543	90	20	-21.8	YP_068223		5' arm      3' arm
29222	+	132057	87	21	-26.6	YP_068223		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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