miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29168	+	45051	89	19.5	-26.1			5' arm      3' arm
29166	+	23336	86	19	-21.4	YP_068124		5' arm      3' arm
29167	+	26403	87	21.5	-19.9			5' arm      3' arm
29165	+	13069	84	24	-22.6	YP_068110		5' arm      3' arm
29163	+	466	90	19.5	-23.9			5' arm      3' arm
29176	+	88299	87	22.5	-27.9	YP_068189		5' arm      3' arm
29174	+	87252	87	19	-24.7			5' arm      3' arm
29190	+	106292	89	20.5	-29.6	YP_068202		5' arm      3' arm
29191	+	107561	88	21	-23.5	YP_068202		5' arm      3' arm
29189	+	104971	89	23.5	-20.6			5' arm      3' arm
29188	+	104167	88	25	-32.5	YP_068200		5' arm      3' arm
29186	+	101615	88	19	-20	YP_068198		5' arm      3' arm
29187	+	103802	89	25.5	-33.7	YP_068200		5' arm      3' arm
29185	+	95525	90	20.5	-20.1	YP_068193		5' arm      3' arm
29184	+	92981	84	20.5	-24.1	YP_068193		5' arm      3' arm
29179	+	91729	90	21.5	-27.2	YP_068191		5' arm      3' arm
29183	+	92667	89	22.5	-22.4	YP_068190		5' arm      3' arm
29181	+	92406	90	23	-27.7	YP_068190		5' arm      3' arm
29180	+	92201	90	25.5	-29.2	YP_068192		5' arm      3' arm
29182	+	92529	87	26	-24.7	YP_068190		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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