miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29333	-	161299	88	25	-28.2			5' arm      3' arm
29349	-	196977	90	23	-20.2	YP_068287		5' arm      3' arm
29364	-	219515	90	21	-20.8	YP_068316		5' arm      3' arm
29331	-	161018	90	26	-26.1			5' arm      3' arm
29361	-	216675	88	21.5	-25.6	YP_068311		5' arm      3' arm
29308	-	82604	87	24	-22.6			5' arm      3' arm
29362	-	217669	89	20.5	-19.7	YP_068313		5' arm      3' arm
29312	-	94721	88	21.5	-25.8	YP_068193		5' arm      3' arm
29314	-	106739	90	21	-24.1	YP_068202		5' arm      3' arm
29320	-	123684	74	19	-32			5' arm      3' arm
29323	-	140306	89	19.5	-22	YP_068232		5' arm      3' arm
29327	-	148748	89	21.5	-24.8			5' arm      3' arm
29330	-	155648	90	21	-21.3	YP_068245		5' arm      3' arm
29335	-	161713	90	29.5	-22.1			5' arm      3' arm
29339	-	172467	90	24.5	-19.5	YP_068256		5' arm      3' arm
29341	-	182507	90	23.5	-20.9			5' arm      3' arm
29344	-	186561	90	27	-27.7			5' arm      3' arm
29352	-	205210	90	20.5	-19.6	YP_068298		5' arm      3' arm
29354	-	210066	90	21.5	-25.4	YP_068303		5' arm      3' arm
29355	-	214771	86	26	-32.1	YP_068308		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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