miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29325	-	147821	87	19	-25			5' arm      3' arm
29324	-	147245	89	21.5	-26.1			5' arm      3' arm
29323	-	140306	89	19.5	-22	YP_068232		5' arm      3' arm
29322	-	135924	89	23	-26.4	YP_068230		5' arm      3' arm
29321	-	134402	89	24.5	-19.8	YP_068228		5' arm      3' arm
29320	-	123684	74	19	-32			5' arm      3' arm
29319	-	118923	84	19	-19.9	YP_068211		5' arm      3' arm
29318	-	118162	90	21	-27.9	YP_068211		5' arm      3' arm
29317	-	111241	89	20	-23.8			5' arm      3' arm
29316	-	108934	88	20.5	-23.2	YP_068203		5' arm      3' arm
29315	-	107649	85	19.5	-23.4	YP_068202		5' arm      3' arm
29314	-	106739	90	21	-24.1	YP_068202		5' arm      3' arm
29313	-	106132	72	20.5	-24.7	YP_068202		5' arm      3' arm
29312	-	94721	88	21.5	-25.8	YP_068193		5' arm      3' arm
29311	-	93583	89	21.5	-21.5	YP_068193		5' arm      3' arm
29310	-	89804	90	23	-29.72			5' arm      3' arm
29309	-	85224	89	22	-30.9	YP_068185		5' arm      3' arm
29308	-	82604	87	24	-22.6			5' arm      3' arm
29307	-	82089	90	21	-23.5	YP_068184		5' arm      3' arm
29306	-	81569	88	19	-29.7	YP_068184		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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