miRNA display CGI


Results 1 - 20 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22973 - 131102 90 20.5 -19.7 NP_932609 5' arm      3' arm
22972 - 130823 90 24 -24.2 NP_932609 5' arm      3' arm
22971 - 122531 89 19 -30.3 NP_932750 5' arm      3' arm
22970 - 120468 87 20 -24.9 NP_932749 5' arm      3' arm
22969 - 119889 89 23 -25.6 NP_932748 5' arm      3' arm
22968 - 119776 87 22.5 -21 NP_932748 5' arm      3' arm
22967 - 119272 87 20.5 -25.87 NP_932747 5' arm      3' arm
22966 - 116448 89 24 -21.5 NP_932743 5' arm      3' arm
22965 - 112765 90 19.5 -23.6 NP_932741 5' arm      3' arm
22964 - 110974 88 20 -21.8 NP_932739 5' arm      3' arm
22963 - 109583 89 19.5 -24.1 NP_932738 5' arm      3' arm
22962 - 108341 74 19 -19.4 NP_932737 5' arm      3' arm
22961 - 108251 90 21 -22.8 NP_932737 5' arm      3' arm
22960 - 108114 90 20.5 -23.3 NP_932737 5' arm      3' arm
22959 - 106851 89 24 -25.3 NP_932735 5' arm      3' arm
22958 - 106682 90 23 -21.4 NP_932735 5' arm      3' arm
22957 - 97504 79 20.5 -25 NP_932725 5' arm      3' arm
22956 - 93800 88 19 -20.7 NP_932720 5' arm      3' arm
22955 - 93640 88 20 -27.7 NP_932720 5' arm      3' arm
22954 - 89323 87 19 -22.5 NP_932712 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.