miRNA display CGI


Results 1 - 20 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22855 + 2425 89 19 -21.5 NP_932614 5' arm      3' arm
22956 - 93800 88 19 -20.7 NP_932720 5' arm      3' arm
22873 + 35560 90 19 -21.3 NP_932654 5' arm      3' arm
22971 - 122531 89 19 -30.3 NP_932750 5' arm      3' arm
22962 - 108341 74 19 -19.4 NP_932737 5' arm      3' arm
22931 - 34722 90 19 -22.3 NP_932654 5' arm      3' arm
22953 - 89102 90 19 -19.6 NP_932712 5' arm      3' arm
22954 - 89323 87 19 -22.5 NP_932712 5' arm      3' arm
22926 - 28043 87 19 -25.3 NP_932645 5' arm      3' arm
22884 + 64141 89 19 -25.5 NP_932687 5' arm      3' arm
22916 - 4365 88 19 -23.2 NP_932617 5' arm      3' arm
22902 + 101042 79 19 -26.6 NP_932730 5' arm      3' arm
22904 + 105919 90 19 -25.2 NP_932733 5' arm      3' arm
22885 + 64692 90 19 -29.2 NP_932687 5' arm      3' arm
22965 - 112765 90 19.5 -23.6 NP_932741 5' arm      3' arm
22963 - 109583 89 19.5 -24.1 NP_932738 5' arm      3' arm
22861 + 12938 89 19.5 -24.3 NP_932625 5' arm      3' arm
22905 + 108679 89 19.5 -25.1 NP_932737 5' arm      3' arm
22877 + 51744 89 19.5 -23.5 NP_932670 5' arm      3' arm
22906 + 110500 88 19.5 -24.9 NP_932739 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.