miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22913	+	126954	90	22	-30.2			5' arm      3' arm
22899	+	98227	89	21.5	-21.3			5' arm      3' arm
22972	-	130823	90	24	-24.2	NP_932609		5' arm      3' arm
22973	-	131102	90	20.5	-19.7	NP_932609		5' arm      3' arm
22915	-	1189	90	24	-20.5	NP_932611		5' arm      3' arm
22855	+	2425	89	19	-21.5	NP_932614		5' arm      3' arm
22916	-	4365	88	19	-23.2	NP_932617		5' arm      3' arm
22856	+	5069	80	19.5	-20.1	NP_932618		5' arm      3' arm
22858	+	7427	90	21	-21.6	NP_932619		5' arm      3' arm
22917	-	7744	89	21.5	-26.2	NP_932619		5' arm      3' arm
22857	+	7306	89	20.5	-21.8	NP_932619		5' arm      3' arm
22859	+	9199	88	21.5	-24.79	NP_932621		5' arm      3' arm
22918	-	10922	89	20.5	-24.5	NP_932623		5' arm      3' arm
22861	+	12938	89	19.5	-24.3	NP_932625		5' arm      3' arm
22919	-	12790	89	20.5	-22.6	NP_932625		5' arm      3' arm
22860	+	11951	85	20.5	-19.61	NP_932625		5' arm      3' arm
22862	+	17455	89	23.5	-23.5	NP_932630		5' arm      3' arm
22920	-	16634	90	22	-22.2	NP_932630		5' arm      3' arm
22921	-	19609	87	21.5	-29.6	NP_932633		5' arm      3' arm
22863	+	20545	90	19.5	-25.9	NP_932635		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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