miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12795	+	11217	87	21	-29.2	NP_569753		5' arm      3' arm
12777	+	1846	88	19	-26.6	NP_569740		5' arm      3' arm
12787	+	6627	89	22.5	-23.7	NP_569745		5' arm      3' arm
12788	+	7070	90	20.5	-21.7	NP_569746		5' arm      3' arm
12786	+	5952	90	20	-35.4			5' arm      3' arm
12784	+	4981	90	19	-22.4	NP_569742		5' arm      3' arm
12785	+	5209	90	19	-21.4	NP_569743		5' arm      3' arm
12798	+	13323	90	23.5	-28.5	NP_569753		5' arm      3' arm
12789	+	9643	89	21.5	-25.5	NP_569751		5' arm      3' arm
12776	+	1688	87	19	-24.3	NP_569740		5' arm      3' arm
12774	+	1086	85	19	-25.5	NP_569740		5' arm      3' arm
12781	+	3197	84	19.5	-21.5	NP_569741		5' arm      3' arm
12780	+	2853	90	23	-21.7	NP_569741		5' arm      3' arm
12783	+	4757	90	22.5	-24.2	NP_569742		5' arm      3' arm
12771	+	419	88	22	-33.1	NP_569739		5' arm      3' arm
12772	+	546	90	22	-23.6	NP_569739		5' arm      3' arm
12782	+	3336	88	22	-23.5	NP_569741		5' arm      3' arm
12775	+	1260	90	21.5	-27.5	NP_569740		5' arm      3' arm
12779	+	2681	87	20.5	-24.3	NP_569741		5' arm      3' arm
12778	+	2474	88	19.5	-26.2	NP_569741		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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