miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13007	-	52728	87	20.5	-20.3			5' arm      3' arm
12817	+	22627	88	19.5	-23.1			5' arm      3' arm
12836	+	31203	90	21.5	-21.9			5' arm      3' arm
12833	+	29853	89	23	-32.2			5' arm      3' arm
12843	+	37221	90	22.5	-20.8			5' arm      3' arm
12844	+	37432	88	19.5	-19.7			5' arm      3' arm
12786	+	5952	90	20	-35.4			5' arm      3' arm
12835	+	30794	90	21	-21.2			5' arm      3' arm
12842	+	36167	90	22	-19.5			5' arm      3' arm
13000	-	51049	85	19	-21			5' arm      3' arm
12998	-	50686	90	19.5	-29.9			5' arm      3' arm
12996	-	50054	85	22	-26.6			5' arm      3' arm
12873	+	50555	89	21.5	-36.2			5' arm      3' arm
12872	+	50011	83	20	-25.2			5' arm      3' arm
12865	+	46793	88	20.5	-23.3			5' arm      3' arm
12984	-	45099	90	21	-20.9			5' arm      3' arm
13001	-	51173	90	24.5	-19.8			5' arm      3' arm
12960	-	37026	89	23.5	-26.2			5' arm      3' arm
12852	+	41645	89	22	-27.6			5' arm      3' arm
12876	+	51026	90	20	-28.6			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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