miRNA display CGI


Results 1 - 20 of 237 are showing below:
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GenBank Identifier RefSeq Acc. Name
18496886 NC_003387.1 Mycobacteriophage TM4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12996 - 50054 85 22 -26.6 5' arm      3' arm
13000 - 51049 85 19 -21 5' arm      3' arm
12842 + 36167 90 22 -19.5 5' arm      3' arm
12835 + 30794 90 21 -21.2 5' arm      3' arm
12786 + 5952 90 20 -35.4 5' arm      3' arm
12844 + 37432 88 19.5 -19.7 5' arm      3' arm
12843 + 37221 90 22.5 -20.8 5' arm      3' arm
12817 + 22627 88 19.5 -23.1 5' arm      3' arm
12836 + 31203 90 21.5 -21.9 5' arm      3' arm
12998 - 50686 90 19.5 -29.9 5' arm      3' arm
13007 - 52728 87 20.5 -20.3 5' arm      3' arm
12872 + 50011 83 20 -25.2 5' arm      3' arm
13001 - 51173 90 24.5 -19.8 5' arm      3' arm
12852 + 41645 89 22 -27.6 5' arm      3' arm
12960 - 37026 89 23.5 -26.2 5' arm      3' arm
12833 + 29853 89 23 -32.2 5' arm      3' arm
12876 + 51026 90 20 -28.6 5' arm      3' arm
12984 - 45099 90 21 -20.9 5' arm      3' arm
12873 + 50555 89 21.5 -36.2 5' arm      3' arm
12865 + 46793 88 20.5 -23.3 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.