miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12927	-	23261	89	19	-21.8			5' arm      3' arm
12777	+	1846	88	19	-26.6	NP_569740		5' arm      3' arm
12935	-	27102	86	19	-20.03	NP_569768		5' arm      3' arm
12807	+	18753	89	19	-22.8	NP_569759		5' arm      3' arm
12820	+	25237	90	19	-22.8	NP_569765		5' arm      3' arm
12784	+	4981	90	19	-22.4	NP_569742		5' arm      3' arm
12785	+	5209	90	19	-21.4	NP_569743		5' arm      3' arm
12827	+	27487	86	19	-21.4	NP_569769		5' arm      3' arm
12875	+	50891	89	19	-25.3	NP_569819		5' arm      3' arm
12776	+	1688	87	19	-24.3	NP_569740		5' arm      3' arm
12774	+	1086	85	19	-25.5	NP_569740		5' arm      3' arm
12987	-	46332	89	19	-22	NP_569808		5' arm      3' arm
12841	+	35415	89	19	-20.1	NP_569787		5' arm      3' arm
12956	-	35466	87	19	-22.2	NP_569787		5' arm      3' arm
12790	+	10227	87	19	-29.6	NP_569753		5' arm      3' arm
13000	-	51049	85	19	-21			5' arm      3' arm
12838	+	34610	88	19	-24.18	NP_569785		5' arm      3' arm
12801	+	15778	89	19	-24.9	NP_569755		5' arm      3' arm
12880	+	51896	88	19	-25.4	NP_569823		5' arm      3' arm
12864	+	46294	82	19	-23	NP_569808		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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