miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12951	-	33710	90	19.5	-20.6	NP_569783		5' arm      3' arm
12897	-	6622	88	19.5	-20.7	NP_569745		5' arm      3' arm
12866	+	47008	89	21.5	-20.7	NP_569810		5' arm      3' arm
12843	+	37221	90	22.5	-20.8			5' arm      3' arm
12984	-	45099	90	21	-20.9			5' arm      3' arm
12797	+	12573	86	19.5	-20.9	NP_569753		5' arm      3' arm
12963	-	37636	90	20.5	-20.9			5' arm      3' arm
12829	+	28192	90	21.5	-20.9	NP_569771		5' arm      3' arm
12968	-	38852	88	20	-20.91	NP_569794		5' arm      3' arm
13000	-	51049	85	19	-21			5' arm      3' arm
12854	+	42357	87	19.5	-21	NP_569803		5' arm      3' arm
12793	+	10997	89	20	-21	NP_569753		5' arm      3' arm
12791	+	10521	86	20.5	-21	NP_569753		5' arm      3' arm
12849	+	39759	88	22	-21.1	NP_569797		5' arm      3' arm
12986	-	45922	88	22	-21.1	NP_569808		5' arm      3' arm
12995	-	49632	88	20	-21.2	NP_569816		5' arm      3' arm
12890	-	4846	90	22.5	-21.2	NP_569742		5' arm      3' arm
12867	+	47820	83	21	-21.2	NP_569813		5' arm      3' arm
12835	+	30794	90	21	-21.2			5' arm      3' arm
12815	+	22007	90	20.5	-21.3	NP_569761		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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