miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23199	5'	-57.4	NC_005259.1	+	8636	0.71	0.357545
	Target:  5'- gGCGAGAAUgGCgGGCACgaGGCugUGGUc -3' miRNA:   3'- -CGCUCUUA-CGgCUGUG--CCGugGCCGu -5'
23199	5'	-57.4	NC_005259.1	+	8222	0.69	0.505161
	Target:  5'- aGCGAGcgugcgguGGUGCCGACACccuGCcuuACCGGUc -3' miRNA:   3'- -CGCUC--------UUACGGCUGUGc--CG---UGGCCGu -5'
23199	5'	-57.4	NC_005259.1	+	8076	0.66	0.662662
	Target:  5'- uCGAGAucGUGCCG-CGCuGGCgugACCGuGCGa -3' miRNA:   3'- cGCUCU--UACGGCuGUG-CCG---UGGC-CGU- -5'
23199	5'	-57.4	NC_005259.1	+	6696	0.66	0.683846
	Target:  5'- -aGAGug-GCgCGACACGaucaACCGGCAg -3' miRNA:   3'- cgCUCuuaCG-GCUGUGCcg--UGGCCGU- -5'
23199	5'	-57.4	NC_005259.1	+	4513	0.71	0.374288
	Target:  5'- cCGGGAGUGgCGcuGCGCGGCAccCCGGUc -3' miRNA:   3'- cGCUCUUACgGC--UGUGCCGU--GGCCGu -5'
23199	5'	-57.4	NC_005259.1	+	4263	0.66	0.641371
	Target:  5'- uGCGAGGAcaacgggcgGCUGcgcugccacgaGCACGG-ACCGGCGg -3' miRNA:   3'- -CGCUCUUa--------CGGC-----------UGUGCCgUGGCCGU- -5'
23199	5'	-57.4	NC_005259.1	+	3107	0.72	0.318027
	Target:  5'- aGCGGGcg-GCCauuGCGCGGCACCgugGGCAg -3' miRNA:   3'- -CGCUCuuaCGGc--UGUGCCGUGG---CCGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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