Results 61 - 80 of 187 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 27359 | 0.67 | 0.926333 |
Target: 5'- cGGCGC--CGGACCGGCGCGagGC-CGg -3' miRNA: 3'- aCCGUGacGUCUGGCUGUGUa-UGuGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 127804 | 0.67 | 0.926333 |
Target: 5'- cGGCGCcgcggcgGCGGGCCGcucGCGCu--CGCGg -3' miRNA: 3'- aCCGUGa------CGUCUGGC---UGUGuauGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 12328 | 0.67 | 0.931704 |
Target: 5'- gGGCGCgcGCuuGGCCGGCGCGgcCGCc -3' miRNA: 3'- aCCGUGa-CGu-CUGGCUGUGUauGUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 33078 | 0.67 | 0.931704 |
Target: 5'- cGGCGCUgGCGGccGCCGcCACAUccccugcgucggGCACu -3' miRNA: 3'- aCCGUGA-CGUC--UGGCuGUGUA------------UGUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 59130 | 0.67 | 0.931704 |
Target: 5'- cGGCcaccgACU-CAGGCCGGCGCGccccggGCGCGc -3' miRNA: 3'- aCCG-----UGAcGUCUGGCUGUGUa-----UGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 110385 | 0.67 | 0.931704 |
Target: 5'- aUGGCGCUGCGG-CUGGacCGCuucUACGCc -3' miRNA: 3'- -ACCGUGACGUCuGGCU--GUGu--AUGUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 44021 | 0.67 | 0.931704 |
Target: 5'- cGGCGCgGCGGGCgGcCGCc-GCGCGg -3' miRNA: 3'- aCCGUGaCGUCUGgCuGUGuaUGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 57502 | 0.67 | 0.936822 |
Target: 5'- gGGCACgucccggcgGCGGGCCuucuucCACAgGCACGg -3' miRNA: 3'- aCCGUGa--------CGUCUGGcu----GUGUaUGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 102967 | 0.67 | 0.92071 |
Target: 5'- gGGCGCcGCGGgcuccGCCGccGCGCGcgACACGg -3' miRNA: 3'- aCCGUGaCGUC-----UGGC--UGUGUa-UGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 14847 | 0.67 | 0.936822 |
Target: 5'- cGGCA--GCAGGCggCGGCGCAUcGCGCa -3' miRNA: 3'- aCCGUgaCGUCUG--GCUGUGUA-UGUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 28271 | 0.67 | 0.936822 |
Target: 5'- gGGCGCUGUugccGCCGcCGCGgcCGCGg -3' miRNA: 3'- aCCGUGACGuc--UGGCuGUGUauGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 32441 | 0.67 | 0.936822 |
Target: 5'- cGGC-CUGgGcGCCGGCACAgucacccccggGCACGg -3' miRNA: 3'- aCCGuGACgUcUGGCUGUGUa----------UGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 44731 | 0.67 | 0.936822 |
Target: 5'- gGGCGCUGCAGcugggccCCGA-GC-UGCGCGc -3' miRNA: 3'- aCCGUGACGUCu------GGCUgUGuAUGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 49472 | 0.67 | 0.936822 |
Target: 5'- gGGCGC-GCAGGCCG-CGCGgaaGCu -3' miRNA: 3'- aCCGUGaCGUCUGGCuGUGUaugUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 71964 | 0.67 | 0.936822 |
Target: 5'- cGGCGCggggcGCGGagcGCgCGGCAgGUGCGCa -3' miRNA: 3'- aCCGUGa----CGUC---UG-GCUGUgUAUGUGc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 87116 | 0.67 | 0.936822 |
Target: 5'- cGGCGUUGUagaaGGGCCG-CGgGUACGCGa -3' miRNA: 3'- aCCGUGACG----UCUGGCuGUgUAUGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 36762 | 0.67 | 0.941688 |
Target: 5'- cUGGCGCcccUGCAcGCCGGCcCGUGCGu- -3' miRNA: 3'- -ACCGUG---ACGUcUGGCUGuGUAUGUgc -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 40400 | 0.67 | 0.941688 |
Target: 5'- aGGacaCGCUGCGcGACagGGcCACGUACACGg -3' miRNA: 3'- aCC---GUGACGU-CUGg-CU-GUGUAUGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 89082 | 0.67 | 0.941688 |
Target: 5'- cUGGUaccgGCUGCGGcCCGgGCGCGcugGCGCGc -3' miRNA: 3'- -ACCG----UGACGUCuGGC-UGUGUa--UGUGC- -5' |
|||||||
23819 | 3' | -53.3 | NC_005261.1 | + | 88192 | 0.67 | 0.941688 |
Target: 5'- cGGCGCcggcgagGCGGGCCG-CGCcgGCAa- -3' miRNA: 3'- aCCGUGa------CGUCUGGCuGUGuaUGUgc -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home