Results 21 - 40 of 300 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 36968 | 0.86 | 0.605601 |
Target: 5'- --aCUUUACCUAAGCUAUAUACUUAUu -3' miRNA: 3'- uggGAAAUGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 136567 | 0.87 | 0.561553 |
Target: 5'- aACCCUUUaacACCUAAGUUAUAUACUUAUu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 25011 | 0.89 | 0.426945 |
Target: 5'- aACUCUUUAUCUAAGCUAUAUACUUAUu -3' miRNA: 3'- -UGGGAAAUGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 23255 | 0.97 | 0.180769 |
Target: 5'- aACCCUUUaacACCUAAGCUAUAUAUUCACa -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 50103 | 0.83 | 0.715906 |
Target: 5'- aACCCUUUgauccuaacACCUAAGCUAcAUACUUACu -3' miRNA: 3'- -UGGGAAA---------UGGAUUCGAUaUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 109915 | 0.85 | 0.627801 |
Target: 5'- aACCCUUUaagACCUAAGCUAUAUGCaaACa -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGagUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 167155 | 0.87 | 0.550664 |
Target: 5'- uCCCUUUaacACCUAAGCUAUAUACUUAa -3' miRNA: 3'- uGGGAAA---UGGAUUCGAUAUAUGAGUg -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 136044 | 0.99 | 0.140953 |
Target: 5'- aACCCUUUAacuCCUAAGCUAUAUACUCACu -3' miRNA: 3'- -UGGGAAAU---GGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 47184 | 0.85 | 0.627801 |
Target: 5'- -aCCUUUaacACUUAAGCUAUAUACUCACc -3' miRNA: 3'- ugGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 104092 | 1 | 0.122463 |
Target: 5'- aACCCUUUACUUAAGCUAUAUACUUACu -3' miRNA: 3'- -UGGGAAAUGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 48378 | 0.87 | 0.561553 |
Target: 5'- aACCCUUUaacACCUAAGUUAUGUACUUAUu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 101127 | 0.85 | 0.616694 |
Target: 5'- aACCCUUuaaaUAUUUAAGCUAUAUACUCAUu -3' miRNA: 3'- -UGGGAA----AUGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 162389 | 0.88 | 0.497347 |
Target: 5'- uCCCUUUaacACCUAAGCUAcAUACUCACu -3' miRNA: 3'- uGGGAAA---UGGAUUCGAUaUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 95943 | 0.89 | 0.426945 |
Target: 5'- uACCCUUUaacACUUAAGUUAUAUACUCACu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 143017 | 0.91 | 0.362799 |
Target: 5'- aACCCUUUaacAUCUAAGCUAUAUACUCAUu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 99555 | 0.97 | 0.185762 |
Target: 5'- aACCCUUUaacACCUAAGCUAUAUACUCAUu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 172604 | 0.82 | 0.768597 |
Target: 5'- aACCCUUUaacACUUAAGCUAUAUACUUg- -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAUAUGAGug -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 97435 | 0.83 | 0.737318 |
Target: 5'- uACCCUUUaacACCUAAGCUAUAcuUACUUAUu -3' miRNA: 3'- -UGGGAAA---UGGAUUCGAUAU--AUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 26257 | 0.84 | 0.705068 |
Target: 5'- uACCCUUUAauaCUuAGCUAUAUACUUACu -3' miRNA: 3'- -UGGGAAAUg--GAuUCGAUAUAUGAGUG- -5' |
|||||||
28291 | 3' | -44.8 | NC_005902.1 | + | 29088 | 0.85 | 0.650016 |
Target: 5'- aAUCCUUuaaUAUUUAAGCUAUAUACUCACu -3' miRNA: 3'- -UGGGAA---AUGGAUUCGAUAUAUGAGUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home