Results 41 - 60 of 317 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 169763 | 0.66 | 0.677733 |
Target: 5'- cGGGgACCCUcGcGGGGGCaCCGGCgcguggagaagaCCCu -3' miRNA: 3'- -UCCgUGGGA-C-CCUCUG-GGCCGaa----------GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 35272 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 35179 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33414 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34808 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34715 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34622 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34529 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 35086 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34343 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34250 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34157 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34064 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33971 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33879 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33786 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33693 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33600 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 33507 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
|||||||
29149 | 3' | -62.1 | NC_006146.1 | + | 34993 | 0.66 | 0.677733 |
Target: 5'- cGGC-CCCgagcuccaggaccGGGcagcGGACCCGGCagcggCCCg -3' miRNA: 3'- uCCGuGGGa------------CCC----UCUGGGCCGaa---GGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home